Deregulation of subcellular biometal homeostasis through loss of the metal transporter, Zip7, in a childhood neurodegenerative disorder
Acta Neuropathologica Communications volume 2, Article number: 25 (2014)
Aberrant biometal metabolism is a key feature of neurodegenerative disorders including Alzheimer’s and Parkinson’s diseases. Metal modulating compounds are promising therapeutics for neurodegeneration, but their mechanism of action remains poorly understood. Neuronal ceroid lipofuscinoses (NCLs), caused by mutations in CLN genes, are fatal childhood neurodegenerative lysosomal storage diseases without a cure. We previously showed biometal accumulation in ovine and murine models of the CLN6 variant NCL, but the mechanism is unknown. This study extended the concept that alteration of biometal functions is involved in pathology in these disorders, and investigated molecular mechanisms underlying impaired biometal trafficking in CLN6 disease.
We observed significant region-specific biometal accumulation and deregulation of metal trafficking pathways prior to disease onset in CLN6 affected sheep. Substantial progressive loss of the ER/Golgi-resident Zn transporter, Zip7, which colocalized with the disease-associated protein, CLN6, may contribute to the subcellular deregulation of biometal homeostasis in NCLs. Importantly, the metal-complex, ZnII(atsm), induced Zip7 upregulation, promoted Zn redistribution and restored Zn-dependent functions in primary mouse Cln6 deficient neurons and astrocytes.
This study demonstrates the central role of the metal transporter, Zip7, in the aberrant biometal metabolism of CLN6 variants of NCL and further highlights the key contribution of deregulated biometal trafficking to the pathology of neurodegenerative diseases. Importantly, our results suggest that ZnII(atsm) may be a candidate for therapeutic trials for NCLs.
Biometals including Zn and Cu are immensely important for brain function. When homeostatic control fails in aging or disease, biometal mislocalization or altered homeostasis can drive pathological changes as observed in patients suffering from neurodegenerative diseases , as the brain is especially vulnerable to metal-induced oxidative stress. Importantly, even subtle changes to biometal concentrations have been associated with significant neuronal pathology .
Neuronal ceroid lipofuscinoses (NCLs), commonly known as Batten diseases, are a genetically heterogeneous group of lysosomal storage diseases (LSDs) , characterized by storage of lipofuscin material in lysosome-derived fluorescent storage bodies [4, 5] and neuronal demise leading to progressive loss of vision, motor dysfunction and premature death . Oxidative stress and neuroinflammation phenotypes in NCLs are reminiscent of other forms of neurodegeneration. Alternative mutations in the metal transporter ATP13a2 have been implicated in an NCL and early onset Parkinsonism, suggesting a common pathway [7–11], however the functions of the NCL proteins and underlying disease processes are not well understood. A variant late infantile and an adult onset NCL are caused by mutations in CLN6, which encodes a highly conserved transmembrane endoplasmic reticulum (ER) protein of unknown function [12, 13].
We previously demonstrated region-specific alterations to biometal homeostasis in ovine CLN6 disease that correlated with the development of neurodegeneration . Moreover, biometal accumulation was associated with region-specific loss of Cln6 mRNA in presymptomatic Cln6 affected mice . However, the mechanisms responsible for these changes remain unknown. Here we show that altered biometal trafficking pathways involve loss of ER-co-localized transmembrane proteins, CLN6 and the metal transporter Zip7, triggering subcellular metal accumulation in presymptomatic CLN6 disease. Moreover, correction of impaired metal-dependent functions in Cln6 cells is achieved via up-regulation of Zip7 by a cell permeable metal complex, ZnII(atsm). These studies demonstrate the potential of biometal modulation for the development of therapeutics for CLN6 disease.
Materials and methods
The CLN6 Merino and South Hampshire research flocks were maintained under standard pasture conditions on University research farms and genotyped as described . As previously reported, Merino CLN6 sheep are phenotypically normal until the age of 8–12 months . From approximately 8 months, the affected sheep exhibit mild behavioural changes and visual impairment, which progress throughout disease course, resulting in premature death between 19 to 27 months of age . Similar to the South Hampshire CLN6 model, the affected Merino sheep brains do not develop normally to maturity and begin to atrophy from approximately 6 months of age. The genotype of Merino sheep was determined by genotyping for the disease causing c.184C > T mutation in the CLN6 gene . Homozygous normal animals were used as controls. CLN6 South Hampshire sheep were used as an additional model of CLN6 disease. For comparison to affected CLN6 South Hampshire sheep, we used unaffected homozygous controls. As an additional control group, we used unaffected heterozygous CLN5 Borderdale sheep, as previously described . All animal procedures were carried out according to NIH guidelines, the NSW Animal Research Act (1985), the New Zealand Animal Welfare Act (1999), and the Australian Code of Practice for the Care and Use of Animals for Scientific Purposes 7th Edition (NHMRC 2004). Brain and peripheral samples were collected from 3, 7 and 14 month-old control and CLN6 affected Merino sheep, 12–14 month-old control and CLN6 affected South Hampshire sheep and unaffected CLN5 heterozygote Borderdale sheep. At post mortem, brains were dissected into the following regions: occipital lobe, parietal lobe, frontal lobe, thalamus, cerebellum and brain stem, and immediately frozen. Liver and muscle (rectus femoris) tissue was also collected for analysis.
Animal handling and experimentation were performed in accordance with national and institutional guidelines (University of Melbourne AEC no. 1112024). The genotypes of affected Cln6 mice  (B6.Cg-Cln6nclf/J, The Jackson Laboratory) were determined as previously described . Mice were euthanized by CO2 asphyxiation or cervical dislocation, as appropriate.
Primary cortical neuronal cultures were established from embryonic day 14 (E14) mice, and primary astrocytes were harvested from neonatal mice as previously described . For primary cortical cultures, E14 mouse cortices were removed, dissected free of meninges and dissociated in 0.025% trypsin. Viable dissociated cells were suspended in Minimum Eagle’s Medium supplemented with 10% fetal bovine serum (FBS), 5% horse serum, 1% glutamine, and 10 μg/mL gentamicin, plated into Poly-D-lysine coated culture plates, and incubated at 37°C in 5% CO2. Growth medium was replaced with Neurobasal growth medium supplemented with B27, glutamine and gentamicin the following day. 3–4 days after plating, half of the media was replaced with fresh Neurobasal media. Cells were used for experiments 6 days after plating.
For astrocyte culture, newborn mice were decapitated, the brains removed and placed into ice-cold preparation buffer (containing 68 mM NaCl, 2.7 mM KCl, 110 μM KH2PO4, 84.5 μM Na2HPO4, 29 mM sucrose, 2.8 mM glucose, 20U/mL penicillin and 34.4pM streptomycin). Brains were diced, then sequentially passed through 250 μm and 135 μm gauze and centrifuged at 500×g for 5 min. Cell pellets were resuspended in growth medium (high glucose DMEM containing 10% FCS, 20U/mL penicillin and 34.4pM streptomycin) and plated into 6 well plates at 1.5×106 cells/well. Cells were maintained at 37°C with 10% CO2. Growth medium was replaced every 7 days, and experiments were performed after 16 days in vitro.
ZnII(atsm) was added to cells cultured in Neurobasal medium for neurons or high glucose DMEM (Life Technologies) containing 10% FCS, 20 U/mL penicillin and 34.3pM streptomycin for astrocytes. High content screening analysis was used to visualize and quantitate neurite characteristics of primary neurons, as described in supplementary methods.
The metal contents in sheep occipital, parietal and frontal lobes, cerebellum, thalamus, brainstem, liver and muscle were measured using inductively coupled plasma mass-spectrometry (ICP-MS) as before .
Cathepsin D assay
Cathepsin D activity was measured using a Fluorometric cathepsin D activity assay kit (Abcam, Cambridge, MA).
Alkaline phosphatase (ALP) assay
ALP activity assays were performed on primary mouse astrocytes, as described , p-nitrophenol release being measured at 405 nm over 30 min using shrimp ALP (Sigma-Aldrich, Castle Hill, NSW, Australia) as a standard.
Mouse neurons were pre-treated with 5 μM FluoZin-3 (Life Technologies) for 30 min, followed by a 30 min washout. Fluorescence was measured with an Enspire plate reader (PerkinElmer, Glen Waverley, Victoria, Australia) in well scan mode at excitation and emission wavelengths of 494 and 516 nm, respectively.
High content screening analysis
Primary cortical mouse neurons plated in clear bottom Costar 96 well plates (Corning, Tewksbury, MA) were treated with ZnII(atsm)  for 1 h, at the concentrations indicated. Cells were fixed for 15 min in 4% PFA in phosphate buffered saline (PBS), permeabilised for 10 min at -20°C with ice-cold 100% methanol, and blocked with 5% FCS and 0.03% Triton-X100 in PBS. Zip7 complexes were detected with rabbit α-Zip7 (1:500; ProteinTech, Chicago, IL) in dilution buffer (1% BSA, 0.03% Triton-X100 in PBS) and goat-α-rabbit IgG AlexaFluor 647 (1:500, Life Technologies). Cell nuclei were stained with DAPI (1.5 μM, Life Technologies). For the measurement of neurite lengths, cellular tubulin was stained with rabbit α-tubulin antibodies (1:50; Cell Signaling, Arundel, Queensland, Australia). Staining in cells was viewed with a Cellomics ArrayScan VTI HCS Reader (Thermo Scientific, Scoresby, Victoria, Australia). The Cellomics ArrayScan VTI HCS Reader is a high throughput microscopy-based screening analysis platform, which provides highly reproducible quantitative and qualitative data that can be obtained from cell populations in 96 well plate format. Due to rapid data acquisition, the ability to measure 1000s of cells per treatment condition and lack of experimenter bias, the Cellomics technology is now well accepted for routine use in neurite outgrowth assays, as evidenced by a number of highly cited publications [24–26]. At least 1,000 cells or 20 fields per well were captured with the 20× objective. Data were analyzed with vHCS 116 Discovery Toolbox software (Thermo Scientific), using the compartmental analysis or neuronal profiling bioapplications, as appropriate (Additional file 1). For analysis of Zip7 staining intensity, the nucleus was identified by DAPI staining using the vHCS 116 Discovery Toolbox software. The perinuclear region of each cell was designated as beginning 2 μm from the perimeter of the nucleus, and extending for a 2 μm radius around the nucleus. The average pixel intensity of this region was calculated and plotted for at least 1000 cells per well, performed in triplicate wells. The experiment was repeated 4 times with similar results.
Immunofluorescent staining was performed as previously described . Briefly, primary cortical mouse neurons were seeded onto coverslips in 24 well plates, treated with ZnII(atsm) for 4 h, fixed in 4% PFA, permeabilised in 0.1% Triton-X100 in PBS, and blocked in 5% FCS in PBS. Zip7 was detected using polyclonal rabbit-α-Zip7 antibodies (1:500), and goat-α-rabbit AlexaFluor 488 (1:500; Life Technologies). Cell nuclei were visualized with DAPI. Coverslips were mounted onto microscope slides with fluorescence mounting media (DAKO, Campbellfield, Victoria, Australia) and visualized with a Leica DMIRB fluorescence microscope. For colocalization studies, primary mouse cortical neurons were reacted with rabbit primary anti-CLN6 and goat primary anti-Zip7 antibodies. Anti-goat AlexaFluor-488 and anti-rabbit AlexaFluor-568 dye labeled secondary antibodies were used to reveal Zip7 and CLN6 expression, respectively. ER localization was determined by staining with the rabbit polyclonal antibodies to the ER marker, calnexin (1:100; Abcam) and anti-rabbit AlexaFluor-568 dye labeled secondary antibodies. Fluorescence was visualized by confocal microscopy using the Zeiss Meta confocal scanning laser microscope with a magnification of 40x.
RNA was prepared from 106 primary mouse neuronal cells using the MagMax Total RNA isolation kit (Life Technologies). RNA (200 ng) was reverse transcribed using the High Capacity cDNA kit (Life Technologies). TaqMan gene expression assays for MT1A and TUBA8 were purchased from Life Technologies (Mm00496660_g1 and Mm00833707_mH, respectively) and qRT-PCR was performed as previously described . Delta Ct method was used for normalization of expression relative to β-tubulin.
Mouse NIH 3T3 cells (6×105/mm2) were cultured for 24 h in DMEM supplemented with 10% FBS, 1% 20 U/mL penicillin, 34.4pM streptomycin, 1% L-Glutamine, 1% HEPES and 1% non essential amino acids. Transfection was achieved with DharmaFECT transfection reagent 4 (Thermo Scientific) and 100 nM Stealth Select RNAi siRNA specific to Zip7 (oligo ID MSS205001) or Negative control High GC siRNA (both from Life Technologies) according to manufacturer specifications. siRNA-transfection reagent complexes were incubated for 20 min in DMEM prior to dropwise addition to cells. Cell media was changed after 24 h to DMEM containing 10% FBS. 72 h after transfection, cells were harvested for Western blotting by scraping and centrifugation (18,000×g, 5 min).
Cell lysates and tissues homogenized with a Dounce tissue grinder were extracted with Phosphosafe (Merck, Kilsyth, Victoria, Australia) containing a protease inhibitor cocktail (Roche, Castle Hill, NSW, Australia) and DNAse (Roche). The protein concentrations of supernatants after centrifugation (12,000×g, 5 min, 4°C) were measured with the BCA assay kit (Pierce) according to manufacturer’s instructions. Equal protein amounts were separated on 12% SDS-PAGE Tris-glycine or 4-12% Bis-Tris gels (Life Technologies), as appropriate. Proteins were transferred to PVDF membranes and blocked with 4% skim milk solution in PBS-Tween. Membranes were probed overnight with primary antibodies diluted in 4% skim milk solution in PBS-Tween. Unless stated otherwise, primary antibodies were raised in rabbits and were diluted 1:1000. The antibodies used in this study were directed against: CLN6 (kindly provided by Dr. Sara Mole, University College London), mouse Zip3 (Abnova), Zip7 (1:2000, Proteintech), Zip8 (1:1200, Proteintech), Zip14 (Novus), ZnT1 (Sigma), ZnT3 (Proteintech), ZnT6 (1:1200, Proteintech), ZnT7 (Proteintech), mouse α-synuclein (1:2000, kindly provided by Professor Malcolm Horne, The Florey Institute of Neurosciences), V-ATPase (GenScript), as well as the phosphorylated form of GSK-3 (Cell Signaling Technologies). The horseradish peroxidase-conjugated anti-mouse or anti-rabbit secondary antibodies (Cell Signaling Technologies) were used at a dilution of 1:5000. Membranes were developed by chemiluminescence (Amersham ECL Advance Western blotting detection kit) and imaged on a Fujifilm LAS3000 Imager (Berthold). Western blots were subjected to densitometry analysis using ImageJ software.
Target band intensities were compared to control bands (ImageJ, Bethesda, MD) on blots probed with antibodies against GAPDH, β-tubulin, total Akt or total ERK used as controls to normalize protein concentrations in CLN6 affected and control animals.
Differences in metal content, gene expression, protein concentrations, ALP activities and neurite characteristics were determined using unpaired Student’s t- tests. p values below 0.05 were considered significant. Data are expressed as means ± SEM and are representative of a minimum of three independent experiments. Where sheep data are presented, N = three or four animals per group. Pearson correlation coefficients were used to determine the strength of correlation between Zn, P-GSK, metallothionein, CLN6 and Zip7 levels in individual sheep.
Impaired lysosomal function and neurodegeneration-associated proteinopathy in NCLs
Lysosomal dysfunction, prior to the onset of clinical signs in CLN6 affected Merino sheep, which occurs at 8–12 months , was demonstrated by reduced cathepsin D activity from 3 months of age (Figure 1A). An age-dependent reduction of subunit B2 of V-ATPase was also observed in the occipital lobe, the site of initial neuropathological changes of South Hampshire CLN6 sheep (Figure 1B) , suggestive of defects in lysosomal functionality . Due to the close relationship between NCLs and Parkinson’s disease, we examined the levels of Parkinson’s disease proteins, α-synuclein, and the metal transporter, ATP13a2. Significantly increased concentrations of the high molecular weight form of α-synuclein  and a trend toward increased ATP13a2 levels (p = 0.1782) were also observed after onset of neurological disease (Figure 1C-D), providing further support for a relationship between Parkinson’s and NCL diseases.
Biometals accumulate in preclinical CLN6 sheep
We previously reported accumulation of Zn, Mn, Co and Cu in disease-affected brain regions of CLN6 Merino and South Hampshire sheep after the onset of clinical signs . To investigate biometal changes in early NCL pathology, we determined metal concentrations in 3 and 7 month old normal and affected Merino sheep (Table 1). Zn concentrations were higher in the parietal lobe and muscle of affected sheep at 7 months of age, but lower in the liver of 3 month-old and plasma of 7 month-old affected sheep. Liver Mn concentrations were substantially reduced, and plasma Co reduced at 3 and 7 months of age (Additional file 2). Cu concentrations in the occipital and frontal lobes were higher in affected animals at both ages while those in the parietal lobe, brainstem and cerebellum where higher than control values at 3 months but lower at 7 months. Increased Cu concentrations were also observed in the liver of 3 and 7 month old CLN6 sheep. Together, these data indicate that disturbances to biometal homeostasis may precede detectable clinical signs in CLN6 disease. Moreover, biometal alterations not only occur in the central nervous system (CNS), but also peripherally in NCL affected animals.
Region-specific alterations to biometal trafficking pathways are associated with loss of CLN6
Western blotting revealed an age related decline in the relative amount of CLN6 in the affected occipital lobe, resulting in very low levels at 14 months (Figure 2A). We assessed the expression levels of the Cu transporters, CTR1, ATP7A, ATP7B, but observed no differences in expression of these proteins between control and CLN6 Merino sheep (unpublished data). We next focused on Zip and ZnT metal transporter proteins, initially identified for Zn transport and reported to transport different subsets of the biometals altered in CLN6 affected sheep [31–35]. The ER/Golgi-resident transporter, Zip7, was progressively lost in the affected occipital lobe in an age-dependent manner from 3 months, reaching statistical significance from 7 months (Figure 2B, full blot of Zip7 shown in Additional file 3). Significantly reduced expression of Zip8, Zip14 and ZnT7 in affected Merino sheep was apparent by 14 months of age (Figure 2C-E), whereas ZnT1, ZnT3 and ZnT6 concentrations were relatively unchanged (Additional file 4). Similar alterations to the concentrations of metal trafficking proteins were also observed in 12 month-old CLN6 affected South Hampshire sheep, except that ZnT6 expression was reduced, while ZnT7 expression was unaffected in this model (Additional file 5). The Zn and Cu sequestering protein, metallothionein (MT), was upregulated ~40 fold in Merino CLN6 sheep at 14 months of age (Figure 2F) consistent with CLN6 affected South Hampshire sheep, as reported . Correlation analysis revealed a strong positive relationship between the levels of Zip7 and CLN6 and a strong negative correlation between Zip7 and MT levels in individual sheep (Figure 2G-H).
In addition to the occipital lobe, a significant decrease in Zip7 occurred in the frontal and parietal lobes of CLN6 affected Merino sheep by 14 months of age (Additional file 6). Significant reductions were also observed in the cerebellum and thalamus of similarly aged CLN6 affected South Hampshire sheep (Additional file 7B-C), indicating that reduction of Zip7 occurs throughout the brain in both breeds of sheep.
Brain Zn is aberrantly elevated in sucrose density gradient fractions corresponding to the ER and Golgi in Cln6 mouse brains . We therefore investigated whether deregulation of subcellular biometal homeostasis also occurred in CLN6 sheep. To investigate early changes, before substantial changes to bulk metal levels were evident, we analyzed occipital lobes from 3-month old control and CLN6 affected Merino sheep (Figure 3). Subcellular distribution profiles of Zn and Cu were significantly altered, with increased Zn and Cu in the lighter fractions (fractions 1–7) of CLN6 affected brains (Figure 3A-B). Interestingly, Zip7 is lost in these fractions in CLN6 affected brains (Figure 3C), consistent with retention of excess metals in those fractions in CLN6 animals. We also probed fractions for CLN6, but were unable to detect CLN6 protein in any fraction (unpublished data).
Cln6 neurons display defects in Cln6 transcription and perinuclear Zip7 staining
Given the challenges of in vitro studies in sheep, we further investigated the role of Zip7 in CLN6 disease using mice carrying a natural mutation in Cln6. Cln6 mRNA expression (Figure 4A) and perinuclear Zip7 staining (Figure 4B,D) were significantly reduced in neurons cultured from Cln6 mutant mice. To investigate whether reduced Zip7 expression was associated with elevated labile Zn content, we used a cell-permeable Zn-binding fluorophore, FluoZin-3, which senses Zn that is not tightly protein-bound (Kd = 15 nM). Consistent with a defect in Zip7-mediated trafficking, readily exchangeable Zn pools were substantially increased in neurons harvested from Cln6 affected mice (Figure 4C). The possibility that the ER-localized transmembrane Zip7 and CLN6 [13, 36], associate was explored through confocal immunofluorescence. Cortical neurons were co-labeled with antibodies to Zip7 (Figure 5B) and CLN6 (Figure 5C). Perinuclear and punctate staining was observed throughout the cell body and neurites, suggestive of ER/Golgi localization. Importantly, a degree of colocalization between CLN6 and Zip7 was observed (Figure 5D), indicating that these proteins may associate in punctate structures throughout the cell. Co-localization of Zip7 with the ER marker, calnexin, verified that Zip7 was at least partially ER-localized (Additional file 8). These results indicate that loss of Zip7 is detectable in mice prior to birth, and provide support for an association between Zip7 and CLN6 disease.
Delivery of bioavailable Zn restores Zn-dependent phenotypes through upregulation of Zip7
Therapeutic modulation of biometal homeostasis has demonstrated promise in the treatment of neurodegenerative disorders [37–39]. Although bulk analysis suggested overall metal accumulation in CLN6 disease, loss of the ER to cytoplasmic metal importer, Zip7, would ultimately drive metal mislocalization to the ER, as previously observed for Zn in Cln6 mutant mouse brain , and may induce deficiencies of bioavailable metals elsewhere in the cell. Membrane-permeable complexes that deliver bioavailable metals may therefore bypass the Zip7 defects in Cln6 cells. In light of this, Zn was delivered using the cell-permeable metallo-complex ZnII(atsm) . ZnII(atsm) treatment significantly decreased the readily exchangeable Zn pool in primary Cln6 neurons, as measured by FluoZin-3 fluorescence (Figure 6A). The apparent paradox of delivering Zn but observing reduced FluoZin-3 fluorescence is likely to occur via ZnII(atsm)-dependent upregulation of MT (Figure 6B), and therefore sequestration of excess labile Zn . The results support abnormal compartmental Zn levels in Cln6 affected cells due to Zip7 loss and the ability of ZnII(atsm) to at least partially rectify this by up-regulation of MT. As increased labile Zn can trigger neurite outgrowth , we next examined the neurite characteristics of Cln6 neurons. Indeed, Cln6 cells displayed longer, more extensively branched neurites, which were retracted upon 1 h treatment with up to 5 μM ZnII(atsm) (Figure 6C, Additional file 1). Together, these data suggest that ZnII(atsm) restores metal homeostasis in Cln6 primary neurons.
Although it is neurons that degenerate in NCL disease, astrocytes are severely affected prior to disease onset in both sheep and mouse NCL models [43, 44]. We therefore also examined a range of Zn-dependent activities in primary astrocytic cultures. We measured the activity of alkaline phosphatase (ALP), a Zn-dependent cytoplasmic enzyme requiring Zn loading by ZnT5 and ZnT7 for full activity . Reduced ALP activity in Cln6 astrocytes was indicative of regional Zn depletion, but was restored by 1 μM ZnII(atsm) treatment (Figure 6D). Elevated labile Zn can result in aberrant GSK3 phosphorylation , evident in CLN6 sheep  and primary Cln6 mouse astrocytes (Figure 6E). ZnII(atsm)-dependent rescue of hyperphosphorylated GSK-3 in Cln6 astrocytes was associated with increased Zip7 (Figure 6E) demonstrating a link between Zn, GSK3 and Zip7 expression. Together the data suggest complex deregulation of subcellular Zn pools in Cln6 cells - increased labile Zn in specific sub-cellular regions and reduced bioavailable Zn in alternative compartments required for enzyme functions. Importantly, our data show a strong in vitro protective effect of ZnII(atsm) on Zn mislocalization caused by Cln6 mutation. Interestingly, Zip7 levels in individual sheep were inversely correlated to levels of P-GSK3 and Zn (Figure 6F-G), supporting functional or regulatory relationships between these proteins and cellular Zn concentrations. Consistent with a role for Zip7 in this process, siRNA knockdown of Zip7 in mouse NIH 3T3 cells resulted in hyperphosphorylation of GSK3 (Figure 6H-J). These data provide further support for a role of Zip7 in homeostatic control of a kinase that is deregulated in neurodegeneration.
We demonstrated that CLN6 loss is associated with significant biometal accumulation in the brains of CLN6 affected Merino sheep prior to onset of clinical signs. We observed deregulated metal transporters belonging to the Zip and ZnT families in affected brain regions (Figure 2B-E). Zip7 was the earliest transporter altered, with loss of expression in sucrose density fractions from 3 month-old CLN6 sheep (Figure 3) and in perinatal mouse Cln6 cells (Figure 4B,D). Zip7 was thus the only transporter with altered expression in multiple CLN6 disease models , and the only ER-localized metal transporter to be altered. Thus we hypothesized that Zip7 is directly affected by loss of CLN6. Indeed, CLN6 co-localized with Zip7 in murine cortical neurons (Figure 5) and reduced Zip7 expression occurred concomitantly with elevated labile Zn in primary Cln6 neurons (Figure 4C). This study implicates Zip7 as a potentially important contributor to NCLs.
Stringent regulation of biometal homeostasis by cellular trafficking systems is critical to prevent metal-induced toxicity. Mn overexposure causes Parkinsonism and α-synuclein accumulation . The latter was observed in CLN6 affected sheep (Figure 1B), occurs in another LSD, Gaucher’s disease , and was recently associated with lysosomal dysfunction in a rare genetic form of parkinsonism, Kufor-Rakeb syndrome, caused by mutations in ATP13a2. Indeed, mutations, altered expression or aberrant functionality of metal transporters belonging to the ATP7, ATP13, TRMPL and ZnT families has been implicated in neurodegenerative disorders with pathological or clinical similarities to NCLs, and in the LSDs, Niemann-Pick C and Mucolipidosis [50–56]. As increased ATP13a2 expression was reported to rescue lysosomal dysfunction in Parkinson’s disease fibroblasts , we hypothesise that upregulation of ATP13a2 in CLN6 affected sheep may similarly compensate to partially improve lysosomal function. Together, these studies emphasize that while the precise mechanisms underlying altered metal homeostasis in neurodegeneration are specific for each disease, neurodegenerative processes involving aberrant cellular metal trafficking are intricately linked at the molecular level.
We reported biometal elevation in the brains of 2 CLN6 affected sheep models post-clinical onset , and in the brains and heart of presymptomatic Cln6 mice . Here we show significantly increased concentrations of Cu and Zn in the brains of Merino CLN6 affected sheep prior to clinical onset. While the spatio-temporal pattern of metal concentrations is variable in tissues, this is not unexpected for several reasons. As reported for Cln6 mice, each brain and peripheral tissue region has different localized metal levels, which can vary across disease course . For instance, the stabilization in the levels of Cu in the brainstem, frontal and parietal lobes observed at 7 months (Table 1) parallels a transient improvement in lysosomal function (Figure 1A). This improvement could represent the temporary efficacy of endogenous compensatory mechanisms such as increased MT expression (Figure 2F) that ultimately fail due to presence of persistent stressors, causing animals to succumb to disease by 14 months of age when metal concentrations rise as reported . Moreover, homeostasis of multiple biometals is highly inter-related, and changes in one metal can greatly affect the absorption or trafficking of others in a cell- and tissue-specific manner . It is also important to recognize that, as physiological control of biometal homeostasis is so precise, even subtle focal mislocalisation of biometals can have a critical impact on cell functions, as evident in Alzheimer’s disease. Although it is now widely recognized that excess extracellular Zn and Cu can promote amyloid β aggregation  and studies suggest that intracellular metal levels are depleted in Alzheimer’s disease , these changes are rarely reflected in studies examining metal levels in bulk tissue homogenates . Similarly, the subtly altered metal concentrations here, while indicative of global metal dyshomeostasis, are insufficient to completely capture the impaired subcellular biometal trafficking dynamics. This is further supported by the significant accumulation of Zn in 3 month-old brains detected in sucrose density fractions (Figure 3), but not by bulk analysis. The substantial increase in MT expression (Figure 2F), consistent with a recent report on MT overexpression in LSDs , is likely a response to subcellular accumulation of Zn and/or Cu in affected brain regions, but overexpressed cytoplasmic MT may not have direct access to effectively sequester mislocalized metal ions. Together these results implicate widespread loss of biometal homeostasis as an early disease feature.
Region-specific early alterations to the CLN6-colocalizing metal transporter, Zip7, in multiple CLN6 disease models indicate an important role of this metal transporter in CLN6 NCL. Visual dysfunction in CLN6 NCL may also be related to Zip7 expression changes, as Zip7 plays a role in brain and eye development in zebrafish . Indeed, Zip7 loss in zebrafish caused eye defects , potentially a phenocopy of CLN6 disease. Moreover, loss of the Drosophila Zip7 homologue, Catsup, was recently implicated in amyloid-precursor like protein accumulation , providing additional links to Zip7 involvement in neurodegeneration. Analysis of interactions between Zip7 and different mutant forms of CLN6 may shed light on the differences in cellular Zip7 concentrations between mouse and sheep CLN6 models.
Due to high affinity interactions with proteins (as predicted by the Irwing-Williams series), the labile cellular Zn content is estimated to be in the high picomolar range , while ER and Golgi labile Zn concentrations are kept at a subpicomolar range . Increased compartmentalized labile Zn as a result of Zip7 loss may give rise to consequential perturbations in the metabolism of other metals. For instance, excess labile Zn may displace redox-active transition metals from metalloproteins, which may participate in Fenton-type ROS-producing reactions. Additionally excess free Zn in the ER or Golgi may aberrantly bind to, and inhibit, proteins. For instance, Zn has been shown to inhibit protein tyrosine phosphatases in the ER at low picomolar concentrations . Moreover, Zip7 loss may preclude kinase-dependent Zn mobilization, termed “Zn wave” signals from being propagated throughout cells , which may impact pleiotropic cellular signaling processes.
Further highlighting the role of Zip7 in CLN6 disease, the metal complex, ZnII(atsm), restored Zn-dependent functions and induced Zip7 upregulation and GSK3 dephosphorylation in primary Cln6 cells. As ZnII(atsm) is membrane-permeable, delivery of Zn to intracellular compartments may bypass impaired cellular Zn trafficking pathways. Labile Zn accumulation in primary Cln6 neurons may be restricted to specific subcellular compartments, as previously reported for Cln6 mouse brains , and may therefore not stimulate MT upregulation prior to addition of ZnII(atsm). Thus, ZnII(atsm) is likely to exert protective effects via a dual mechanism involving combined induction of Zip7 and MT. Zip7 induced by ZnII(atsm) may protect cells from toxic accumulation of compartmentalized labile metals by transporting these metals from the ER or Golgi, resulting in normalization of subcellular metal levels. This would promote an increase in bioavailable metals resulting in enhanced activity of Zn-requiring enzymes such as ALP (Figure 6D). Concomitantly, induction of MT is likely to result in MT-dependent sequestration of any excess metals that are liberated from the ER or Golgi in Cln6 cells that are not directly required for enzymatic functions.
Impaired metal homeostasis is a key hallmark of neurodegenerative disease. Here we show that aberrant biometal functions in CLN6 disease are driven by loss of the metal transporter, Zip7. The protective and metal modulating effects of ZnII(atsm) treatment in vitro, coupled with the proven success of metal btsc compounds in improving motor and cognitive functions in neurodegeneration models in vivo[37–39], suggest that ZnII(atsm) may be a candidate for NCL therapeutic trials.
Central nervous system
Inductively coupled plasma mass-spectrometry
lysosomal storage disease
Neuronal ceroid lipofuscinosis.
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We thank Dr Sara Mole and Sophia Kleine Holthaus, University College, London, for the CLN6 antibody; Professor David Palmer, Faculty of Agriculture and Life Sciences, Lincoln University, New Zealand for the CLN6 affected South Hampshire samples and Dr. Susan Piripi for assisting in collection of Merino samples. Cellomics neurite growth experiments were performed at the MHTP High Content Screening Centre with the assistance of Dr. Trevor Wilson. This work was supported by The Sigrid Juselius Foundation, the Academy of Finland, the Australian Research Council (ARC), and the National Health and Medical Research Council of Australia (NHMRC). ARW is a recipient of an ARC Future Fellowship. The funding sources had no influence in study design; collection, analysis, and interpretation of data; writing the report; or the decision to submit the report for publication.
Patent protection has previously been sought by the University of Melbourne for the use of bis(thiosemicarbazones) for treatment of diseases. ARW and PSD are co-inventors on this patent application PCT/AU2007/001792, which is the subject of a commercialization contract between the University and a private company. The company has not funded nor contributed to research described in this manuscript.
AG, ARW and KMK designed research. AG, KMK, CD, JT, SJP, AC, GEL, JM, LB, IV, DM and JRL performed research. AG, IV, ARW and KMK analyzed the data. AG and KMK wrote the paper. ARW, PJC, JRL and JK provided critical revisions of the manuscript. IT, MH, PSD, JLH and SL synthesized reagents and collected sheep tissue samples. All authors read and approved the final manuscript.
Anthony R White and Katja M Kanninen contributed equally to this work.
Electronic supplementary material
Additional file 1: Zn II (atsm) treatment reduces aberrant neurite branching in primary Cln6 cortical neurons. (A) Neurite branching in control (black bars) and Cln6 (white bars) primary cortical neurons treated for 1 h with ZnII(atsm) was determined by tubulin immunofluorescence. (B) Representative image of tubulin staining of primary cortical neurons. Images (>1,000 cells/well) were taken using the ArrayScan High Content Platform. (C) Analysis was performed using Neuronal Profiling software. Processed images show nuclei (blue), cell bodies (cyan), neurites (green or magenta for neurites from neighboring neurons for easier identification), branch points (yellow). (PDF 370 KB)
Additional file 3: Zip7 concentrations are significantly and progressively reduced in CLN6 sheep. Immunoblots of homogenates (5 μg) isolated from the occipital lobe of 3 and 14 month-old control (C) or CLN6 affected sheep (N = 3-4 per group) probed with antibodies directed against Zip7. Total ERK was used as a loading control. (PDF 407 KB)
Additional file 4: Unaltered metal transporter proteins in Merino CLN6 affected sheep. (A-C) Densitometry and representative immunoblots of homogenates (5–40 μg) isolated from the occipital lobe of 3, 7 and 14 month old control or CLN6 affected Merino sheep (N = 3 per group) probed with antibodies directed against ZnT1 (A), ZnT3 (B) or ZnT6 (C). GAPDH, β-tubulin, total Akt or total ERK, as appropriate, were used as loading controls. Quantification was performed in ImageJ and metal transporter levels are expressed relative to those in control sheep at each age. C, control. (PDF 2 MB)
Additional file 5: Alterations to metal transporter protein concentrations in South Hampshire CLN6 affected sheep. Densitometry of western blots of homogenates (5–40 μg) isolated from the occipital lobe 12–14 month old control or CLN6 affected South Hampshire sheep or CLN5 heterozygote Borderdale sheep probed with antibodies directed against a range of metal transporters. GAPDH was used as a loading control. Quantification was performed in ImageJ and metal transporter levels are expressed relative to those in control sheep at each age. * p < 0.05, ** p < 0.01 by Student’s t test. C, control; H, heterozygote; A, affected. (PDF 60 KB)
Additional file 6: Zip7 loss is region specific in Merino CLN6 affected sheep. Densitometry analyses and representative western blots of Zip7 levels in the frontal lobe (A), parietal lobe (B) thalamus (C), cerebellum (D), brainstem (E), liver (F) and muscle (G) of 3, 7, and 14-month-old control and CLN6 Merino sheep. GAPDH was used as a loading control. Quantitation was performed in ImageJ and metal transporter concentrations are expressed relative to those in control sheep at each age. ** p < 0.01, *** p < 0.001 by Student’s t test. (PDF 2 MB)
Additional file 7: Zip7 loss is region specific South Hampshire CLN6 affected sheep. Densitometry of Zip7 western blots in the frontal lobe (A), thalamus (B), cerebellum (C), brainstem (D) in 12–14 month old control or CLN6 affected South Hampshire sheep (N = 3 per group) or CLN5 heterozygote Borderdale sheep (N = 2). GAPDH was used as a loading control. Quantification was performed in ImageJ and metal transporter concentrations are expressed relative to those in control sheep at each age. * p < 0.05, ** p < 0.01 by Student’s t test. C, control; H, heterozygote; A, affected. (PDF 62 KB)
Additional file 8: Zip7 co-localizes with ER in primary cortical neurons. Primary mouse cortical neurons were fixed and stained with goat primary anti-Zip7 and rabbit primary anti-calnexin antibodies. Anti-rabbit AlexaFluor-568 and anti-goat AlexaFluor 488 dye labeled secondary antibodies were used to reveal Zip7 and calnexin expression. Nuclei were stained with DAPI. (A) DAPI, (B) Zip7 and (C) calnexin expression in primary cortical neurons was visualized by confocal microscopy using the Zeiss Meta confocal scanning laser microscope using a magnification of 20×. (D) Overlay images. Scale bars correspond to 20 μm. (PDF 762 KB)
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Grubman, A., Lidgerwood, G.E., Duncan, C. et al. Deregulation of subcellular biometal homeostasis through loss of the metal transporter, Zip7, in a childhood neurodegenerative disorder. acta neuropathol commun 2, 25 (2014). https://doi.org/10.1186/2051-5960-2-25
- Biometal homeostasis
- Neuronal ceroid lipofuscinoses