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Table 1 Overview of all cases analyzed and entity specific alterations with frequencies

From: A comprehensive DNA panel next generation sequencing approach supporting diagnostics and therapy prediction in neurooncology

Entity

#

Aberrations

#

Frequency

Astrocytic glioma, IDH-mutant (WHO grade II/III/IV)

19

IDH1/2

19

100%

TP53

18

95%

ATRX

7

37%

CDKN2A HomDel

2

11%

Oligodendroglioma, IDH-mutant 1p/19q-codeleted

(WHO grade II/III)

14

IDH1/2

14

100%

1p/19q LOH

14

100%

TERTp

14

100%

CIC

11

79%

FUBP1

4

29%

Astrocytic glioma, IDH-wildtype (WHO grade I/II/III/IV)

42

TERTp

30

71%

10 DEL / 7 AMP

14

33%

EGFR Highcopy

9

21%

TP53

9

21%

NF1

5

12%

BRAF

4

10%

Diffuse midline glioma, H3K27M-mutant (WHO grade IV)

2

H3F3A

2

100%

TP53

2

100%

Meningioma (WHO grade I/II/III)

19

NF2

15

79%

SMARCB1

15

79%

1p DEL

12

63%

CDKN2A HomDel

4

21%

TERTp

0

0%

Medulloblastoma (WHO grade IV)

8

TERTp

3

38%

TP53

2

25%

OTX2 Highcopy

1

13%

CTNNB1

1

13%

Monosomy 6

1

13%

Isochromosome 17

1

13%

  1. AMP: amplification, DEL: deletion, Highcopy: highcopy amplification, HomDel: homozygous loss, LOH: loss of heterozygosity