Table 1 Gene expression datasets used for the meta-analysis
Cell Type | Dataset | Tissue | Species | Platform | Data Format | Reference |
|---|---|---|---|---|---|---|
microglia | GSM1134004 GSM1134006 GSM1134009 GSM1134010 GSM1134012 GSM1134015 GSM1134055 GSM1134056 GSM1134057 | brain | mouse | Aroma Aroma Aroma Expression console Expression console Expression console RNA-seq RNA-seq RNA-seq | CEL / microarray CEL / microarray CEL / microarray CEL / microarray CEL / microarray CEL / microarray | Pong et al. 2013 [33] |
peripheral monocytes/ macrophages | GSM1134005 GSM1134007 GSM1134008 GSM1134011 GSM1134013 GSM1134014 GSM1134052 GSM1134053 GSM1134054 | Bone marrow | mouse | Aroma Aroma Aroma Expression console Expression console Expression console RNA-seq RNA-seq RNA-seq | CEL / microarray CEL / microarray CEL / microarray CEL / microarray CEL / microarray CEL / microarray | Pong et al. 2013 [33] |
microglia | SRX424861 SRX424857 | brain | mouse | RNA-seq RNA-seq | Â | Hickman et al. 2013 [22] |
peripheral monocytes/ macrophages | SRX424925 SRX424919 SRX424904 SRX424890 SRX424880 SRX424879 SRX424878 | peritoneum | mouse | RNA-seq RNA-seq RNA-seq RNA-seq RNA-seq RNA-seq RNA-seq | Â | Hickman et al. 2013 [22] |
microglia | GSM1181585 GSM1181587 GSM1181589 | brain | mouse | Affymetrix Affymetrix Affymetrix | CEL / microarray CEL / microarray CEL / microarray | Butovsky et al. 2014 [7] |
peripheral monocytes/ macrophages | GSM1181579 GSM1181581 GSM1181583 | spleen | mouse | Affymetrix Affymetrix Affymetrix | CEL / microarray CEL / microarray CEL / microarray | Butovsky et al. 2014 [7] |
microglia | GSM2590424 GSM2590425 GSM2590426 | brain | mouse | RNA-seq RNA-seq RNA-seq | Â | (Bowman et al. 2016 [5] |
peripheral monocytes/ macrophages | GSM2590427 GSM2590428 GSM2590429 GSM2590430 GSM2590431 | blood | mouse | RNA-seq RNA-seq RNA-seq RNA-seq RNA-seq | Â | (Bowman et al. 2016 [5] |