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Table 4 Mitochondrial proteins that show altered expression

From: Mitochondrial dysfunction is a key pathological driver of early stage Parkinson’s

ID

Name

SN

Put

Para

Fron

ACO1

Aconitase 1

1.017

1.105

1.725

1.036

ACO2

Aconitase 2

1.218

 − 1.131

1.186

1.252

AIFM1

Apoptosis inducing factor mitochondria associated 1

1.219

1.273

 − 1.072

1.246

ATP5F1A

ATP synthase F1 subunit alpha

1.748

 − 1.437

1.243

1.217

ATP5F1B

ATP synthase F1 subunit beta

2.617

1.057

1.091

1.37

ATP5F1C

ATP synthase F1 subunit gamma

3.771

 − 1.132

 − 1.386

1.383

ATP5F1D

ATP synthase F1 subunit delta

 − 1.096

1.168

 − 1.281

1.208

ATP5ME

ATP synthase membrane subunit e

1.53

 − 1.019

1.18

 − 1.395

ATP5MF

ATP synthase membrane subunit f

 − 1.163

 − 1.207

1.19

1.089

ATP5MG

ATP synthase membrane subunit g

1.452

1.015

1.068

1.145

ATP5PB

ATP synthase peripheral stalk-membrane subunit b

2.056

 − 1.114

1.256

1.041

ATP5PD

ATP synthase peripheral stalk subunit d

 − 1.051

 − 1.153

1.328

1.137

ATP5PF

ATP synthase peripheral stalk subunit F6

 − 1.599

1.073

1.265

1.11

ATP5PO

ATP synthase peripheral stalk subunit OSCP

2.228

 − 1.136

1.251

1.247

ATPAF2

ATP synthase mitochondrial F1 complex assembly factor 2

 − 2.474

1.373

1.024

1.221

CAT

Catalase

1.599

 − 1.591

1.273

 − 1.07

COX4I1

Cytochrome c oxidase subunit 4I1

1.209

 − 1.057

1.389

1.403

COX5A

Cytochrome c oxidase subunit 5A

 − 1.4

 − 1.124

1.32

1.476

COX5B

Cytochrome c oxidase subunit 5B

1.15

 − 1.009

1.169

1.255

COX6A1

Cytochrome c oxidase subunit 6A1

1.39

 − 1.198

 − 1.158

1.306

COX6B1

Cytochrome c oxidase subunit 6B1

 − 1.107

1.311

 − 1.683

2.323

COX7A2

Cytochrome c oxidase subunit 7A2

1.037

 − 1.333

 − 1.694

1.367

COX7C

Cytochrome c oxidase subunit 7C

 − 1.601

 − 1.15

 − 1.115

1.193

CYB5R3

Cytochrome b5 reductase 3

1.053

 − 1.134

 − 1.002

1.042

CYC1

Cytochrome c1

1.512

 − 1.055

1.381

1.375

CYCS

Cytochrome c, somatic

1.358

1.085

1.091

1.62

FIS1

Fission, mitochondrial 1

 − 1.254

 − 1.043

1.106

 − 1.093

GPD2

Glycerol-3-phosphate dehydrogenase 2

1.69

1.06

1.166

1.016

GPX4

Glutathione peroxidase 4

1.505

 − 1.039

1.035

 − 1.114

GSR

Glutathione-disulfide reductase

 − 1.592

 − 1.247

1.276

1.781

HSD17B10

Hydroxysteroid 17-beta dehydrogenase 10

 − 1.79

 − 1.16

1.149

 − 1.032

HTRA2

HtrA serine peptidase 2

1.414

1.032

1.047

1.123

MAOA

Monoamine oxidase A

1.055

 − 1.118

1.102

1.213

MAOB

Monoamine oxidase B

1.543

 − 1.111

 − 1.253

 − 1.089

MAP2K4

Mitogen-activated protein kinase inase 4

1.469

1.163

1.155

 − 1.012

MAPK9

Mitogen-activated protein kinase 9

 − 9.433

NA

1.238

 − 1.14

MT-ATP6

ATP synthase F0 subunit 6

2.2

 − 2.204

 − 16.992

1.588

MT-CO1

Cytochrome c oxidase subunit I

1.233

 − 1.936

NA

NA

MT-CO2

Cytochrome c oxidase subunit II

2.063

 − 1.129

1.227

1.577

MT-ND4

NADH dehydrogenase, subunit 4 (complex I)

5.659

 − 1.082

1.048

1.167

NDUFA10

NADH:ubiquinone oxidoreductase subunit A10

1.391

 − 1.067

1.046

1.499

NDUFA11

NADH:ubiquinone oxidoreductase subunit A11

1.174

 − 1.357

1.579

1.293

NDUFA12

NADH:ubiquinone oxidoreductase subunit A12

1.45

 − 1.196

1.234

1.194

NDUFA13

NADH:ubiquinone oxidoreductase subunit A13

 − 1.378

1.085

1.526

2.629

NDUFA2

NADH:ubiquinone oxidoreductase subunit A2

1.301

 − 1.154

1.166

 − 1.121

NDUFA3

NADH:ubiquinone oxidoreductase subunit A3

4.303

1.12

 − 2.074

 − 1.255

NDUFA4

NDUFA4 mitochondrial complex associated

1.808

 − 1.156

1.54

1.187

NDUFA5

NADH:ubiquinone oxidoreductase subunit A5

1.133

 − 1.19

1.183

1.425

NDUFA6

NADH:ubiquinone oxidoreductase subunit A6

1.479

 − 1.104

1.212

2.249

NDUFA7

NADH:ubiquinone oxidoreductase subunit A7

1.192

1.044

1.254

 − 1.507

NDUFA8

NADH:ubiquinone oxidoreductase subunit A8

1.047

 − 1.109

 − 1.994

1.062

NDUFA9

NADH:ubiquinone oxidoreductase subunit A9

1.442

 − 1.069

1.245

1.297

NDUFB10

NADH:ubiquinone oxidoreductase subunit B10

1.506

1.038

1.131

1.198

NDUFB11

NADH:ubiquinone oxidoreductase subunit B11

 − 1.076

 − 1.018

1.005

1.448

NDUFB3

NADH:ubiquinone oxidoreductase subunit B3

1.592

1.025

1.074

1.228

NDUFB4

NADH:ubiquinone oxidoreductase subunit B4

 − 1.122

 − 1.039

1.156

1.261

NDUFB6

NADH:ubiquinone oxidoreductase subunit B6

3.766

1.078

 − 5.285

 − 1.123

NDUFB7

NADH:ubiquinone oxidoreductase subunit B7

1.091

2.52

NA

NA

NDUFB9

NADH:ubiquinone oxidoreductase subunit B9

 − 1.002

1.031

1.203

1.278

NDUFS1

NADH:ubiquinone oxidoreductase core subunit S1

1.415

 − 1.151

1

1.147

NDUFS2

NADH:ubiquinone oxidoreductase core subunit S2

5.867

 − 1.019

-1.016

1.061

NDUFS3

NADH:ubiquinone oxidoreductase core subunit S3

1.224

1.038

1.163

1.445

NDUFS4

NADH:ubiquinone oxidoreductase subunit S4

1.384

1.062

1.099

 − 2.262

NDUFS5

NADH:ubiquinone oxidoreductase subunit S5

1.534

 − 1.249

 − 1.324

1.281

NDUFS6

NADH:ubiquinone oxidoreductase subunit S6

 − 1.329

 − 1.261

 − 1.138

1.254

NDUFS7

NADH:ubiquinone oxidoreductase core subunit S7

1.621

 − 1.274

1.071

1.48

NDUFS8

NADH:ubiquinone oxidoreductase core subunit S8

1.521

 − 1.017

1.046

1.271

NDUFV1

NADH:ubiquinone oxidoreductase core subunit V1

1.301

 − 1.153

1.011

1.521

NDUFV2

NADH:ubiquinone oxidoreductase core subunit V2

 − 1.217

 − 1.056

1.593

1.554

OGDH

Oxoglutarate dehydrogenase

 − 1.284

1.071

 − 1.097

1.123

PARK7

Parkinsonism associated deglycase

1.405

 − 1.064

 − 1.18

 − 1.059

PDHA1

Pyruvate dehydrogenase E1 alpha 1 subunit

 − 1.167

 − 1.565

1.106

1.253

PRDX3

Peroxiredoxin 3

1.393

1.08

1.154

1.267

PRDX5

Peroxiredoxin 5

 − 1.19

 − 1.184

 − 1.11

1.079

RHOT2

Ras homolog family member T2

 − 1.367

NA

NA

NA

SDHA

Succinate dehydrogenase complex flavoprotein subunit A

1.492

1.009

1.202

 − 1.412

SDHB

Succinate dehydrogenase complex iron sulfur subunit B

1.519

 − 1.121

 − 1.056

1.116

SNCA

Synuclein alpha

2.154

 − 1.311

1.229

1.091

SOD2

Superoxide dismutase 2

1.485

 − 1.35

 − 1.073

1.215

TXN2

Thioredoxin 2

 − 1.908

NA

NA

NA

UQCRB

Ubiquinol-cytochrome c reductase binding protein

 − 1.15

 − 1.03

1.17

 − 1.267

UQCRC1

Ubiquinol-cytochrome c reductase core protein 1

2.346

 − 1.294

 − 1.469

1.473

UQCRC2

Ubiquinol-cytochrome c reductase core protein 2

1.29

 − 1.138

 − 1.297

1.141

UQCRFS1

Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1

 − 1.21

 − 1.002

 − 1.01

1.191

UQCRH

Ubiquinol-cytochrome c reductase hinge protein

 − 1.691

NA

 − 3.694

NA

UQCRQ

Ubiquinol-cytochrome c reductase complex III subunit VII

2.212

1.027

1.057

1.069

VDAC1

Voltage dependent anion channel 1

2.691

 − 1.067

1.352

1.057

VDAC2

Voltage dependent anion channel 2

1.57

 − 1.004

1.053

1.209

VDAC3

Voltage dependent anion channel 3

1.723

 − 1.207

1.055

1.208

  1. All proteins involved in mitochondrial dysfunction pathway (as determined by IPA) and the fold change expression for each in early PD compared to controls per region