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Table 1 Marker genes selected for identification of the four new CNS categories of tumors

From: Molecular identification of CNS NB-FOXR2, CNS EFT-CIC, CNS HGNET-MN1 and CNS HGNET-BCOR pediatric brain tumors using tumor-specific signature genes

    This study Sturm et al., 2016
Group Probe Gene Top position
significance
Fold Top position
significance
HGNET-BCOR 219433_at BCOR Group marker   Group marker
HGNET-BCOR 215264_at EMX1 1 65.5 122
HGNET-BCOR 230311_s_at PRDM6 3 13.2 47
HGNET-BCOR 230700_at RTN4RL1 22 12.2 40
HGNET-BCOR 244467_at SHISA8 29 29.2 12
HGNET-BCOR 214614_at MNX1 37 27.9 60
HGNET-BCOR 203365_s_at MMP15 59 10.1 13
HGNET-MN1 1553842_at BEND2 Group marker   Group marker
HGNET-MN1 223347_at MUM1 2 16 8
HGNET-MN1 207570_at SHOX 3 362 7
HGNET-MN1 235548_at APCDD1L 5 185 18
HGNET-MN1 219140_s_at RBP4 6 158 51
HGNET-MN1 219729_at PRRX2 10 38.6 112
HGNET-MN1 227194_at FAM3B 15 320 13
HGNET-MN1 201135_at ECHS1 9
NB-FOXR2 1569669_at FOXR2 Group marker   Group marker
NB-FOXR2 239499_at DNAH2 45 34.5 7
NB-FOXR2 209842_at SOX10 74 95.9 23
NB-FOXR2 222095_s_at FAM163A 93 19.8 24
EFT-CIC 212338_at MYO1D 11 31.7 8
EFT-CIC 209616_s_at CES1 17 197 43
EFT-CIC 235849_at SCARA5 44 167 45
EFT-CIC 215161_at CAMK1G 62 130 1
EFT-CIC 235238_at SHC4 80 37.5 6
EFT-CIC 1554576_a_at ETV4 91
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