From: Molecular and clinicopathologic features of gliomas harboring NTRK fusions
Case | Assay detecting NTRK fusion | NTRK fusion | 5’ fusion partner breakpoint or transcript | 3’ fusion partner breakpoint or transcript |
---|---|---|---|---|
23 | DNA-based NGS | ARGLU1-NTRK1 | Exon 3 | Exon 11 |
29 | DNA-based NGS | ARHGEF11-NTRK1 | Exon 39 | Exon 10 |
10 | RNA-based fusion panel | ARHGEF2-NTRK1 | Exon 21 | Exon 10 |
40 | DNA-based NGS | ARHGEF2-NTRK1 | Exon 21 | Exon 9 |
27 | DNA-based NGS | BCAN-NTRK1 | Exon 13 | Exon 8 |
30 | DNA-based NGS | BCAN-NTRK1 | Exon 6 | Exon 8 |
31 | DNA-based NGS | BCAN-NTRK1 | Exon 14 | Exon 11 |
32 | DNA-based NGS | BCAN-NTRK1 | Exon 13 | Exon 9 |
8 | DNA-based NGS | CD247-NTRK1 | Intron 1 | Exon 15 |
42 | DNA-based NGS | CHTOP-NTRK1 | Exon 5 | Exon 8 |
21 | RNA-based fusion panel | KIF21B-NTRK1a | Unknown | Unknown |
9 | DNA-based NGS | LMNA-NTRK1 | Intron 5 | Intron 10 |
41 | DNA-based NGS | LMNA-NTRK1 | Exon 12 | Exon 11 |
26 | DNA-based NGS | NTRK1-NFASC | Exon 7 | Exon 3 |
24 | DNA-based NGS | NOS1AP-NTRK1 | Exon 10 | Exon 9 |
33 | DNA-based NGS | TPM3-NTRK1 | Exon 10 | Exon 12 |
36 | DNA-based NGS | TPM3-NTRK1 | Exon 7 | Exon 12 |
37 | DNA-based NGS | TPM3-NTRK1 | Exon 10 | Exon 9 |
38 | DNA-based NGS | TPM3-NTRK1 | Exon 7 | Exon 8 |
19 | RNA-based fusion panel | TPR and NTRK1a,b | Unknown | Unknown |
25 | DNA-based NGS | AFAP1-NTRK2 | Exon 14 | Exon 12 |
11 | DNA-based NGS | BCR-NTRK2 | Intron 1 | Intron 12 |
28 | DNA-based NGS | BCR-NTRK2 | Exon 1 | Exon 13 |
5 | RNA-based fusion panel | EML1-NTRK2 | Exon 2 | Exon 16 |
4 | RNA-based fusion panel | GKAP1-NTRK2 | Exon 9 | Exon 15 |
15 | RNA-based fusion panel | KANK1-NTRK2 | Exon 12 | Exon 3 |
16 | RNA-based fusion panel | KCTD16-NTRK2 | Exon 3 | Exon 16 |
1 | RNA-based fusion panel | NBPF20-NTRK2 | Exon 16 | Exon 15 |
39 | DNA-based NGS | PAIP1-NTRK2 | Exon 9 | Exon 13 |
18 | RNA-based fusion panel | QKI-NTRK2 | Exon 6 | Exon 16 |
2 | RNA-based fusion panel | SPECC1L-NTRK2 | Exon 11 | Exon 17 |
22 | RNA-based NGS | TNS3-NTRK2a | Exon 16 | Exon 12 |
3 | RNA-based fusion panel | TRIM24-NTRK2 | Exon 12 | Exon 15 |
17 | RNA-based fusion panel | TRIM24-NTRK2c | Exon 12 | Exon 15, exon 16 |
34 | DNA-based NGS | DLG1-NTRK3 | Exon 10 | Exon 11 |
6 | RNA-based fusion panel | ETV6-NTRK3 | Exon 4 | Exon 14 |
14 | RNA-based fusion panel | ETV6-NTRK3 | Exon 4 | Exon 14 |
20 | DNA-based NGS | ETV6-NTRK3 | Intron 4 | Intron 12 |
35 | DNA-based NGS | ETV6-NTRK3 | Exon 5 | Exon 15 |
12 | RNA-based fusion panel | FRY-NTRK3 | Exon 1 | Exon 14 |
13 | DNA-based NGS | KIAA1199-NTRK3 | Intron 1 | Intron 5 |
7 | DNA-based NGS | MYO5A-NTRK3 | Intron 33 | Exon 9 |