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Table 1 Genes implicated in Parkinson disease and atypical parkinsonian syndromes

From: Genetic perspective on the synergistic connection between vesicular transport, lysosomal and mitochondrial pathways associated with Parkinson’s disease pathogenesis

Gene

MOI

Mutation spectrum

Mutation mechanism

Clinical phenotype

Levodopa response

Pathology

Protein product

Pathway

References

ATP10B

AR

Missense and splice site mutations

LOF

EOPD/LOPD

Limited, levodopa-induced dyskinesia

Unknown

Phospholipid transporting ATPase 10B

Endo-lysosome

[213]

ATP13A2

AR

Missense and PTC mutations

LOF

Juvenile APS called Kufor-Rakeb syndrome with pyramidal signs, supranuclear gaze palsy and cognitive impairment; NCL; HSP

Good

Lipofuscinosis

Cation transporting ATPase 13A2

Endo-lysosome

[37, 90, 257, 277]

ATP6AP2

XR

p.Ser115Ser and

p.Asp107Asp

LOF

Juvenile APS with slow disease progression and considerable phenotypic variability including spasticity, intellectual disability and epilepsy

Limited, levodopa-induced dyskinesia

LB-, tau+b

Renin/prorenin receptor

Endo-lysosome

[176, 279]

DJ-1

AR

Deletions, PTC and missense mutations

LOF

EOPD with slow disease progression and rarely autonomic dysfunctions or cognitive impairment

Limited, levodopa-induced dyskinesia

LB + b

DJ-1

Mitochondria

[3, 31, 163, 334].

DNAJC6

AR

c.802-2A > G, p.Thr741Thr, p.Gln791b, p.Gln846b,

p.Arg927Gly

LOF

Juvenile and early-onset APS with rapidly disease progression and possible intellectual disability, seizures and pyramidal signs.

Limited, levodopa-induced dyskinesia and psychiatric features

Unknown

Auxilin

Vesicular transport

[85, 175, 240]

FBXO7

AR

PTC and missense mutations

LOF

Ranging from classic EOPD to juvenile APS with pyramidal signs (spasticity, impaired fine movements and increased reflexes)

Limited, levodopa-induced dyskinesia and psychiatric features

Unknown

F-box protein 7

Mitochondria

[76, 125, 149, 204, 311, 369]

PARK2

AR

Deletions, PTC and missense mutations

LOF

EOPD with slow disease progression and rarely autonomic dysfunctions or cognitive impairment

Limited, levodopa-induced dyskinesia

Most LB-

Parkin

Mitochondria

[1, 156, 160, 264]

PINK1

AR

Deletions, PTC and missense mutations

LOF

EOPD with slow disease progression and rarely autonomic dysfunctions or cognitive impairment

Limited, levodopa-induced dyskinesia

LB + b

PTEN-induced kinase 1

Mitochondria

[156, 293]

PLA2G6

AR

CNV, PTC and missense mutations

LOF

Early-onset APS called dystonia-parkinsonism with cognitive decline, autonomic dysfunction and psychiatric manifestations; INAD; atypical NAD

Limited, levodopa-induced dyskinesia

Axonal spheroid,

iron deposits

Phospholipase A2

Endo-lysosome

[126, 139, 157, 161, 184, 249, 316, 370]

LRRK2

AD

Missense mutations

GOF

LOPD with slow disease progression and rarely cognitive impairment

Good

Most LB+, rarely tau+

Leucine-rich repeat kinase 2

Vesicular transport

[132, 251, 285, 346, 379]

SNCA

AD

Multiplications, p.Ala30Pro, p.Glu46Lys, p.Gly51Asp, p.Ala53Glu and p.Ala53Thra

GOF

EOPD/LOPD with severe, rapidly disease progression and cognitive impairment; DLB; MSA

Good

LB+

α-Synuclein

Vesicular transport

[6, 28, 162, 181, 191, 263, 272, 284, 295, 317, 372]

SYNJ1

AR

p.Arg258Gln, p.Arg459Pro

LOF

Juvenile APS with possible cognitive impairment, epilepsy and dystonia

Limited, levodopa-induced dyskinesia

LB-, tau+b

Synaptojanin 1

Vesicular transport

[168, 180, 239, 273]

VPS13C

AR

Deletions and PTC mutations

LOF

EOPD/DLB with severe, rapidly disease progression and cognitive decline

Good

LB+

Vacuolar protein sorting 13C

Endo-lysosome

[69, 183, 193, 297]

VPS35

AD

p.Asp620Asn

LOF

LOPD with slow disease progression and rarely cognitive impairment or neuropsychiatric symptoms

Good

Unknown

Vacuolar protein sorting 35

Vesicular transport

[275, 364]

  1. aPathogenicity of the SNCA p.His50Gln is uncertain [28]. bNeuropathological report of a single carrier. Abbreviations: MOI, mode of inheritance; AR autosomal recessive, AD autosomal dominant, XR X-linked recessive, EOPD early-onset Parkinson disease; LOPD, late-onset Parkinson disease, APS atypical parkinsonian syndrome; MSA multiple system atrophy, DLB dementia with Lewy bodies; NCL neuronal ceroid-lipofuscinosis, HSP hereditary spastic paraplegia, INAD infantile neuroaxonal dystrophy, NAD neuroaxonal dystrophy, PTC premature termination codon, CNV copy number variation, LB+ positive for Lewy body pathology, LB- negative for Lewy body pathology; tau+, positive for tau pathology