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Table 2 Differentially Methylated Probes

From: Epigenetic modulation of AREL1 and increased HLA expression in brains of multiple system atrophy patients

FractionProbe IDChrPositionGeneGene featureCpG islandΔβ (%)PAdj. PchromHMMFunction
5mCcg087534071475,151,317AREL1BodyOpen sea−0.091.47E-073.60E-025_TxWkUbiquitination and antigen presentation
5mCcg03452759231,467,215 IGROpen sea0.031.91E-073.60E-0215_Quies 
5mCcg24646067587,812,057 IGROpen sea−0.082.00E-073.60E-0215_Quies 
5mCcg273123121456,046,001KTN1TSS1500Shore0.042.08E-073.60E-021_TssAMicrotubulue-associated protein
5mCcg16096172646,924,482 IGROpen sea0.032.46E-073.60E-0215_Quies 
  1. Differentially methylated probes (FDR < 0.05) in the 5-methylcytosine (5mC) fraction. Probe ID Illumina probe ID, Chr chromosome, Position chromosomal position, chromHMM ChromHMM [40] data for the dorsolateral prefrontal cortex; 5_TxWk weak transcription activity, 15_Quies quiescent transcription, 1_TssA active TSS