From: Human neuronal changes in brain edema and increased intracranial pressure
Gene symbol | Microarray | QPCR | ||||||
---|---|---|---|---|---|---|---|---|
Log2 change ([odema] vs [cont]) | p value (OneWay Welch ANOVA) | Fold change | Regulation | Log2 change (ΔΔCt [odema] vs [cont]) | p value (Student’s ttest) | Fold change | Regulation | |
Control versus Edema | ||||||||
AQP1 | 1.71 | 0.0383 | 3.26 | up | 5.20 | 0.0000 | 36.85 | up |
AQP3 | 2.28 | 0.0007 | 4.87 | up | 3.02 | 0.0005 | 8.11 | up |
CACNA1B | −1.06 | 0.0282 | −2.09 | down | −2.71 | 0.0025 | −6.55 | down |
CRH | −2.82 | 0.0000 | −7.06 | down | −3.59 | 0.0046 | −12.00 | down |
DRD5 | −1.17 | 0.0037 | −2.26 | down | −3.32 | 0.0045 | −9.98 | down |
GABRA4 | −2.12 | 0.0091 | −4.36 | down | 1.02 | 0.1008 | 2.03 | up |
GNRH1 | −0.35 | 0.0629 | −1.28 | nc | −2.14 | 0.0309 | −4.42 | down |
GRIA3 | −1.34 | 0.0132 | −2.53 | down | −2.59 | 0.0058 | −6.03 | down |
GRID1 | −1.12 | 0.0230 | −2.17 | down | 0.42 | 0.6465 | 1.34 | nc |
HMOX1 | 1.68 | 0.0013 | 3.21 | up | 2.57 | 0.0035 | 5.93 | up |
KCNN4 | 1.58 | 0.0002 | 2.99 | up | 1.63 | 0.0434 | 3.09 | up |
KCTD12 | 1.06 | 0.0025 | 2.09 | up | 0.34 | 0.6573 | 1.27 | nc |
NEUROD6 | −2.37 | 0.0020 | −5.17 | down | −0.16 | 0.8805 | 0.89 | nc |
NPY1R | −1.61 | 0.0122 | −3.06 | down | −1.55 | 0.0069 | −2.93 | down |
SCN3B | 1.33 | 0.0235 | 2.52 | up | 2.07 | 0.0057 | 4.20 | up |
SOD2 | 1.01 | 0.0030 | 2.02 | up | 3.33 | 0.0014 | 10.06 | up |
Control versus Pressure | ||||||||
AQP1 | 0.13 | 0.0383 | 1.09 | nc | 4.78 | 0.0015 | 27.38 | up |
GRIK4 | 0.18 | 0.0237 | 1.13 | nc | −2.44 | 0.0144 | −5.41 | down |
HTR5A | 1.20 | 0.0178 | 2.29 | up | 1.44 | 0.0221 | 2.71 | up |
KCNAB3 | 0.90 | 0.0008 | 1.86 | up | 1.52 | 0.0279 | 2.87 | up |
KCNS1 | 1.09 | 0.0200 | 2.14 | up | 3.05 | 0.0006 | 8.25 | up |
KCNS3 | 1.09 | 0.0024 | 2.13 | up | 0.77 | 0.5766 | 1.71 | nc |
PVALB | 1.16 | 0.0011 | 2.24 | up | 2.02 | 0.0056 | 4.04 | up |
SLC2A3 | −0.37 | 0.0231 | −1.30 | nc | −1.21 | 0.0267 | −2.31 | down |
SLC2A9 | −0.22 | 0.4318 | −1.16 | nc | −2.01 | 0.0056 | −4.02 | down |