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Table 1 8 Genes associated with brainstem gliomagenesis but not cerebral cortex gliomagenesis and differentially expressed between Brainstem Glioma (BSG) and Cerebral Cortex Glioma (CG) in the mouse

From: Pax3 expression enhances PDGF-B-induced brainstem gliomagenesis and characterizes a subset of brainstem glioma

Gene symbol Gene title Fold-change BSG vs NBS p-value Fold-change BSG vs CG p-value
Pax3 paired box gene 3 4.96 1.04E-05 8.44 1.20E-06
Pax3 paired box gene 3 3.87 2.19E-04 6.32 2.45E-05
Irx5 Iroquois related homeobox 5 (Drosophila) 3.35 2.67E-03 19.01 6.15E-06
Pax3 paired box gene 3 2.61 2.86E-04 3.70 3.24E-05
Pcyt1b phosphate cytidylyltransferase 1, choline, beta isoform 2.49 1.11E-05 2.46 1.24E-05
4933436C20Rik RIKEN cDNA 4933436C20 gene 2.47 4.35E-05 2.99 1.08E-05
Myo5b myosin VB −2.41 5.53E-03 −7.59 2.41E-05
Bmp4 bone morphogenetic protein 4 −2.57 3.47E-07 −2.77 1.94E-07
Chl1 cell adhesion molecule with homology to L1CAM −7.21 2.66E-06 −12.91 3.66E-07
Al314604 expressed sequence Al314604 −45.25 8.64E-11 −8.89 7.21E-09
  1. Genes in bold are also differentially expressed between Olig2-eGFP-L10a BSG and CG (See Additional file 5: Table S4). NBS = Normal brainstem.
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