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Table 3 Variants detected within the non-coding region of mtDNA in normal brain tissue (n = 13)

From: The identification of mitochondrial DNA variants in glioblastoma multiforme

   

Percentage change in variant (%)

 

Reference position

Reference

Variant

03-965

04-273

05-470

07-104

07-445

07-635

08-012

08-026

09-005

09-152

16-1

22-1

20-1

Gene region

16069

C

T

  

7.2

          

D loop - Membrane attachment site, Hypervariable segment 1

16126

T

C

  

5.2

          

D loop - Membrane attachment site, Hypervariable segment 1, 7S DNA

16145

G

A

  

4.8

          

D loop - Membrane attachment site, Hypervariable segment 1, 7S DNA, termination-associated sequence

16179

C

T

        

4.3

    

D loop - Membrane attachment site, Hypervariable segment 1, 7S DNA

16222

C

T

  

5.1

           

16261

C

T

  

9.4

           

16293

A

G

 

16.1

            

16356

T

C

        

3.0

     

16519

T

C

57.5

 

54.5

  

56.0

 

57.6

58.3

59.4

   

D loop - Membrane attachment site, 7S DNA

9

G

T

  

5.8

           

10

T

C

  

5.8

           

66

G

T

            

3.2

D-loop - Hypervariable segment 2, membrane attachment site, 7S DNA

73

A

G

  

6.2

          

150

C

T

        

4.4

    

D loop - Hypervariable segment 2, H-strand origin, Membrane attachment site, 7S DNA

189

A

G

      

3.0

      

195

T

C

        

4.5

    

D loop - Hypervariable segment 2, H-strand origin, Membrane attachment site

242

C

T

  

7.7

          

D loop - Hypervariable segment 2, H-strand origin, mtTF1 binding site, Membrane attachment site

751

A

T

      

3.9

      

12s ribosomal RNA (rRNA)

2232

A

T

     

3.0

       

16s ribosomal RNA (rRNA)

2647

G

C

  

12.1

           

3010

G

A

  

3.5

           
  1. Variants represented those that were present at or above the 3% mutation threshold selection criteria. Variants that have not been previously reported are in bold.